Fig. 5

Circular representation of profiled bacterial taxonomies according to the presence of the ASVs in the samples. Maximum likelihood phylogenetic trees of the complete set of bacteria recovered in this study. From the center to the borders, the tree shows ASVs of the Marine bacteria, the Culturable bacteria, from bacteria grown in NM with and without antibiotics, and bacteria grown in SM with and without antibiotics, from PSh (squares) and AFS (circles). The resistance profile of bacterial isolates is shown by filled squares in light yellow, yellow and orange for AFS, and purple, light purple and pink for PSh. The color of the clades corresponds to the phylum taxonomic level, and the ASVs orders are shown in colored letters in the first inner circle. Asterisks indicate taxa recovered after antibiotic exposure